Two node attributes were added to the input SSN: 1) Neighborhood Connectivity
that quantitates the internode connections and 2) Neighborhood Connectivity Coloring
that assigns a color based on the value of the NC.
The Data File Download tab provides the SSN with the nodes colored according to
the value of the Neighborhood Connectivity Coloring.
The Neighborhood Connectivity Color Scale download provides the color scale in
the SSN.
Rémi Zallot, Nils Oberg, and John A. Gerlt, The EFI Web Resource for Genomic Enzymology Tools: Leveraging Protein, Genome, and Metagenome Databases to Discover Novel Enzymes and Metabolic Pathways. Biochemistry 2019 58 (41), 4169-4182. https://doi.org/10.1021/acs.biochem.9b00735
Nils Oberg, Rémi Zallot, and John A. Gerlt, EFI-EST, EFI-GNT, and EFI-CGFP: Enzyme Function Initiative (EFI) Web Resource for Genomic Enzymology Tools. J Mol Biol 2023. https://doi.org/10.1016/j.jmb.2023.168018
Colored SSN
Each node in the submitted SSN has been colored by NC, and a Neighborhood Connectivity attribute
has been added with the NC factor.