|Minimum sequence length||650|
|Identify search type||DIAMOND|
|CD-HIT identity for ShortBRED family definition||85|
|Number of SSN clusters||200|
|Number of SSN singletons||196|
|SSN sequence source||UniRef90|
|Number of SSN (meta)nodes||4,178|
|Number of accession IDs in SSN||16,274|
|Number of unique sequences in SSN||12,762|
|Number of CD-HIT ShortBRED families||3,203|
|Number of markers||16,347|
Markers that uniquely define clusters in the submitted SSN have been identified.
Files detailing the identities of the markers and which sequences they represent are available for download.
The SSN submitted has been edited to include the marker ID and type and the number of markers that were identified.
|SSN with marker results||27 MB|
The CD-HIT ShortBRED families by cluster file contains mappings of ShortBRED families to SSN cluster number as well as a color that is assigned to each unique ShortBRED family. The ShortBRED marker data file lists the markers that were identified.
|CD-HIT ShortBRED families by cluster||<1 MB|
|ShortBRED marker data||1 MB|